The 2012–13 FC St. Pauli season was the 102nd season in the club’s football history. In 2012–13 the club played in the 2. Fußball-Bundesliga the second tier of German football. It was the clubs second consecutive season in the league having played at this level since 2011–12 after it was relegated from the Fußball-Bundesliga in 2012.The club also tooks part in the 2012–13 edition of the DFB-Pokal the German Cup where it reached the second round and faced Bundesliga side VfB Stuttgart.
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